Glad that helped.
Tip 1 - read the manual
The words are for a dual channel set up (dry/effect) and the labelling numbers are there to tell you which is priority in a mono set up.
TBH I'm unsure how it managed to 'bypass' pedals before it, but I'm insane enough without spending too much time trying to figure that one out!!! I agree with the comment above. Personally I run dirt before modulation as the dirt adds new upper harmonics which the chorus and flange effects will then be applied too (makes them cut through better!). That said, if you've read any of my blog posts you'll see that I'm a big advocate of 'trying everything'! If it sounds right to you then that's right!!
The synth Wah is likely best early in the chain, though worth noting that 90% of effects will say they work best first receiving a clean signal so don't take it as written. Octave effects tend to sound a little odd after dirt (IMO) though so maybe leave it where it is.
Glad we sorted the issue!